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Structural characterization of gas-phase cysteine and cysteine methyl ester complexes with zinc and cadmium dications by infrared multiple photon dissociation spectroscopy

机译:红外多光子离解光谱技术表征锌和镉指示的气相半胱氨酸和半胱氨酸甲酯配合物

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摘要

Structural characterization of gas-phase ions of cysteine (Cys) and cysteine methyl ester (CysOMe) complexed to zinc and cadmium is investigated by infrared multiple photon dissociation (IRMPD) action spectroscopy using a free electron laser in combination with density functional theory calculations. IRMPD spectra are measured for [Zn(Cys-H)](+), [Cd(Cys-H)](+), [Zn(CysOMe-H)](+), [Cd(CysOMe-H)](+) and CdCl+(CysOMe) and are accompanied by quantum mechanical calculations of the predicted linear absorption spectra at the B3LYP/6-311+G(d,p) (Zn2+ complexes) and B3LYP/def2TZVP levels (Cd2+ complexes). On the basis of these experiments and calculations, the conformation that best reproduces the IRMPD spectra for the complexes of the deprotonated amino acids, [M(Cys-H)](+) and [M(CysOMe-H)](+), is a charge-solvated (CS) tridentate structure where the metal dication binds to the amine and carbonyl groups of the amino acid backbone and the deprotonated sulfur atom of the side chain, [N,CO,S-]. The intact amino acid complex, CdCl+(CysOMe) binds in the equivalent motif [N,CO,S]. These binding motifs are in agreement with the predicted ground structures of these complexes at the B3LYP, B3LYP-GD3BJ (with empirical dispersion corrections), B3P86, and MP2(full) levels.
机译:通过红外多光子离解(IRMPD)作用光谱,结合自由电子激光和密度泛函理论计算,研究了与锌和镉络合的半胱氨酸(Cys)和半胱氨酸甲酯(CysOMe)气相离子的结构特征。测量了[Zn(Cys-H)](+),[Cd(Cys-H)](+),[Zn(CysOMe-H)](+),[Cd(CysOMe-H)]( +)和CdCl +(CysOMe)并伴随对B3LYP / 6-311 + G(d,p)(Zn2 +络合物)和B3LYP / def2TZVP水平(Cd2 +络合物)的线性吸收光谱的量子力学计算。在这些实验和计算的基础上,可以最好地复制去质子化氨基酸[M(Cys-H)](+)和[M(CysOMe-H)](+)的配合物的IRMPD光谱,是一种带电荷的(CS)三齿结构,其中金属离子与氨基酸主链的胺基和羰基以及侧链[N,CO,S-]的去质子化硫原子结合。完整的氨基酸复合物CdCl +(CysOMe)以等效的基序[N,CO,S]结合。这些结合基序与这些复合物在B3LYP,B3LYP-GD3BJ(具有经验色散校正),B3P86和MP2(完整)水平下的预测底结构相符。

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